TF_ChIP-seq_ENCSR498TWD
TF_ChIP-seq ENCSR498TWD [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MAF1" and target="MAF1"]
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| Id: | TF_ChIP-seq/ENCSR498TWD |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR498TWD [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MAF1" and target="MAF1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens MAF1 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN016HAY|/analyses/ENCAN016HAY/} has in progress subobject document {b52e1d2b-714d-4db5-bb91-131e5f03f6ef|/documents/b52e1d2b-714d-4db5-bb91-131e5f03f6ef/} audit_internal_action: Released analysis {ENCAN016HAY|/analyses/ENCAN016HAY/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF976LBY|/files/ENCFF976LBY/} processed by ChIP-seq ENCODE4 v1.5.0 GRCh38 pipeline have a rescue ratio of 1.12 and a self consistency ratio of 2.39. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF925PQA|/files/ENCFF925PQA/} processed by ChIP-seq ENCODE4 v1.5.0 GRCh38 pipeline have a rescue ratio of 1.12 and a self consistency ratio of 2.39. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR498TWD | float |
TF_ChIP-seq_ENCSR498TWD |
TF_ChIP-seq ENCSR498TWD [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MAF1" and target="MAF1"]
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[7.46, 385] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF976LBY.bed.gz | 143.38 KB | 0d751fbb58d22381f74c09c1796d2b64 |
| ENCFF976LBY.bed.gz.dvc | 100.0 B | 805ec191dfca1d204ce0466b8976fb32 |
| ENCFF976LBY.tabix.bed.gz | 105.79 KB | 92e9060b04c6904b5830fd4a9da475f2 |
| ENCFF976LBY.tabix.bed.gz.dvc | 106.0 B | 8499cb12ad953aab42451c051a7b9631 |
| ENCFF976LBY.tabix.bed.gz.tbi | 55.87 KB | daf975c24304b33aed80c0471e26befd |
| ENCFF976LBY.tabix.bed.gz.tbi.dvc | 109.0 B | 797cb74998a43528a49359dfde37a09f |
| genomic_resource.yaml | 2.94 KB | 6b4e886ec67e19448d77b52bfb852e90 |
| genomic_resource_original.yaml | 2.78 KB | 54fe493170f37c58597cf7d96bfae4d5 |
| statistics/ |