TF_ChIP-seq_ENCSR359NFW
TF_ChIP-seq ENCSR359NFW [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens USF2" and target="USF2"]
×
| Id: | TF_ChIP-seq/ENCSR359NFW |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR359NFW [biosamplesummary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens USF2" and target="USF2"] |
| Description: |
status: archived biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens USF2 output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN285BWZ|/analyses/ENCAN285BWZ/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Processed alignments file {ENCFF523PEG|/files/ENCFF523PEG/} processed by ChIP-seq ENCODE3 hg19 pipeline has 11552770 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting USF2-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF918WMQ|/files/ENCFF918WMQ/} processed by ChIP-seq ENCODE3 hg19 pipeline has 16175902 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting USF2-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR359NFW | float |
TF_ChIP-seq_ENCSR359NFW |
TF_ChIP-seq ENCSR359NFW [biosample_summary="Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens USF2" and target="USF2"]
|
|
[18.7, 1.16e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF417TXD.bed.gz | 261.04 KB | b55f438e6fa9a3b6ae13846dda2ca4b7 |
| ENCFF417TXD.bed.gz.dvc | 100.0 B | 193a556febf4751bda7378e72a8d1ee7 |
| ENCFF417TXD.tabix.bed.gz | 227.03 KB | ba7062c77cbc4b4962bb4d5b023da102 |
| ENCFF417TXD.tabix.bed.gz.dvc | 106.0 B | 1c6e7324af27d97c899bd2f7f5f2f6d6 |
| ENCFF417TXD.tabix.bed.gz.tbi | 114.85 KB | 728d1a5ff0cd606b163ce2ca7c423b46 |
| ENCFF417TXD.tabix.bed.gz.tbi.dvc | 110.0 B | 8fb2e1e6ed248f348df50612fcd5dfa3 |
| genomic_resource.yaml | 2.64 KB | da6883830096816ea681acf8994b5c2c |
| genomic_resource_original.yaml | 2.48 KB | dc31be72d6a66ec873c8709aaff317cf |
| statistics/ |