TF_ChIP-seq_ENCSR038RXU
TF_ChIP-seq ENCSR038RXU [biosample_summary="Homo sapiens MCF-7 stably expressing GABPA" and target="GABPA"]
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| Id: | TF_ChIP-seq/ENCSR038RXU |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR038RXU [biosamplesummary="Homo sapiens MCF-7 stably expressing GABPA" and target="GABPA"] |
| Description: |
status: archived biological_replicates: Rep 1, Rep 2 summary: stably expressing C-terminal eGFP-tagged GABPA output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN679POV|/analyses/ENCAN679POV/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_internal_action: Archived file {ENCFF620TOF|/files/ENCFF620TOF/} has replaced subobject file {7e5ea6db-b812-4d5b-a70b-a11f8b4711a4|/files/7e5ea6db-b812-4d5b-a70b-a11f8b4711a4/} audit_warning: Processed alignments file {ENCFF191KBY|/files/ENCFF191KBY/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 18074945 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting GABPA-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR038RXU | float |
TF_ChIP-seq_ENCSR038RXU |
TF_ChIP-seq ENCSR038RXU [biosample_summary="Homo sapiens MCF-7 stably expressing GABPA" and target="GABPA"]
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[10.2, 840] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF620TOF.bed.gz | 72.9 KB | 8474c19e5de804d9ba4b9933260b6881 |
| ENCFF620TOF.bed.gz.dvc | 99.0 B | c1ec099bb9555621084306eb8000b3ff |
| ENCFF620TOF.tabix.bed.gz | 57.39 KB | e0ebc55fa78562c602bb50985f11fe82 |
| ENCFF620TOF.tabix.bed.gz.dvc | 105.0 B | ddbdd203fa2c4db2c632286a84eb2853 |
| ENCFF620TOF.tabix.bed.gz.tbi | 34.08 KB | c4a5f5d0b1d1dd5966f8bf814ecc3241 |
| ENCFF620TOF.tabix.bed.gz.tbi.dvc | 109.0 B | a6ad141591e7e277bf2ee15067e0b41d |
| genomic_resource.yaml | 2.17 KB | 9231a2f207559e89a1d223d2931cfee6 |
| genomic_resource_original.yaml | 2.05 KB | 716c2c2ddd13e976a119784522899671 |
| statistics/ |