| Id: | TF_ChIP-seq/ENCSR000EGB |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000EGB [biosamplesummary="Homo sapiens K562" and target="TBL1XR1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN569LVO|/analyses/ENCAN569LVO/} has in progress subobject document {79184c24-3d9c-4c7f-9451-e1209cddcd7f|/documents/79184c24-3d9c-4c7f-9451-e1209cddcd7f/} audit_internal_action: Released analysis {ENCAN569LVO|/analyses/ENCAN569LVO/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: PBC2 (PCR Bottlenecking Coefficient 2, M1/M2) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where two reads map uniquely (M2). A PBC2 value in the range 0 - 1 is severe bottlenecking, 1 - 3 is moderate bottlenecking, 3 - 10 is mild bottlenecking, > 10 is no bottlenecking. PBC2 value > 10 is recommended, but > 3 is acceptable. ENCODE processed alignments file {ENCFF473TSK|/files/ENCFF473TSK/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline was generated from a library with PBC2 value of 9.85. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000EGB | float |
TF_ChIP-seq_ENCSR000EGB |
TF_ChIP-seq ENCSR000EGB [biosample_summary="Homo sapiens K562" and target="TBL1XR1"]
|
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[7.72, 371] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF967URJ.bed.gz | 266.72 KB | b387b78004a2068e23114fccf88ce1ed |
| ENCFF967URJ.bed.gz.dvc | 100.0 B | ee83c47b85aba15be260bb8d3cd70c21 |
| ENCFF967URJ.tabix.bed.gz | 189.11 KB | 4a4982985f882538dcdef204dd26ec0c |
| ENCFF967URJ.tabix.bed.gz.dvc | 106.0 B | 90d31e9095064c0dfdad0a7e878318ed |
| ENCFF967URJ.tabix.bed.gz.tbi | 104.42 KB | 26f90f26bc9ae5f31d239df7b01b509a |
| ENCFF967URJ.tabix.bed.gz.tbi.dvc | 110.0 B | f52f3c58b5f78c0b4728b176b60a583c |
| genomic_resource.yaml | 2.2 KB | 431c115e23724b93372629ce6975f2f6 |
| genomic_resource_original.yaml | 2.11 KB | 1952d84d22d0a815078810f80c06923c |
| statistics/ |