type: position_score
table:
  filename: ENCFF967URJ.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: TF_ChIP-seq_ENCSR000EGB
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ChIP-seq ENCSR000EGB [TISSUE: Homo sapiens K562, TARGET: TBL1XR1]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: IDR thresholded peaks\n\n**audit\\_internal\\\
    _action**: Released analysis {ENCAN569LVO|/analyses/ENCAN569LVO/} has in progress\
    \ subobject document {79184c24-3d9c-4c7f-9451-e1209cddcd7f|/documents/79184c24-3d9c-4c7f-9451-e1209cddcd7f/}\n\
    \n**audit\\_internal\\_action**: Released analysis {ENCAN569LVO|/analyses/ENCAN569LVO/}\
    \ has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/}\n\
    \n**audit\\_warning**: PBC2 (PCR Bottlenecking Coefficient 2, M1/M2) is the ratio\
    \ of the number of genomic locations where exactly one read maps uniquely (M1)\
    \ to the number of genomic locations where two reads map uniquely (M2). A PBC2\
    \ value in the range 0 - 1 is severe bottlenecking, 1 - 3 is moderate bottlenecking,\
    \ 3 - 10 is mild bottlenecking, > 10 is no bottlenecking. PBC2 value > 10 is recommended,\
    \ but > 3 is acceptable. ENCODE processed alignments file {ENCFF473TSK|/files/ENCFF473TSK/}\
    \ processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline was generated from a library\
    \ with PBC2 value of 9.85."
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000EGB
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens K562
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0002067/
    perturbed: false
    doi: 10.17989/ENCSR000EGB
    date_created: '2014-02-12T22:36:53.016899+00:00'
    date_released: '2012-05-14'
    submitter_comment: ''
    target: TBL1XR1
