TF_ChIP-seq_ENCSR000DWH
TF_ChIP-seq ENCSR000DWH [biosample_summary="Homo sapiens MCF-7" and target="CTCF"]
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| Id: | TF_ChIP-seq/ENCSR000DWH |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000DWH [biosamplesummary="Homo sapiens MCF-7" and target="CTCF"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN938MIE|/analyses/ENCAN938MIE/} has in progress subobject document {6aef7ca2-3dc2-4f05-a296-d77045c73c16|/documents/6aef7ca2-3dc2-4f05-a296-d77045c73c16/} audit_internal_action: Released analysis {ENCAN938MIE|/analyses/ENCAN938MIE/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Processed alignments file {ENCFF623IZG|/files/ENCFF623IZG/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 19528958 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting CTCF-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF340FIT|/files/ENCFF340FIT/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 18786248 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting CTCF-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000DWH | float |
TF_ChIP-seq_ENCSR000DWH |
TF_ChIP-seq ENCSR000DWH [biosample_summary="Homo sapiens MCF-7" and target="CTCF"]
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[5.12, 578] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF948CYD.bed.gz | 992.94 KB | 3c49037e4ae2107d3e151e5c7be8f6f7 |
| ENCFF948CYD.bed.gz.dvc | 101.0 B | 06220d760a03e6aff5f3cbb5708487bd |
| ENCFF948CYD.tabix.bed.gz | 744.19 KB | 238b04c772ad59dee5eda55e831fc493 |
| ENCFF948CYD.tabix.bed.gz.dvc | 106.0 B | cd132ef8d07ebf91d7be860c3f736d9b |
| ENCFF948CYD.tabix.bed.gz.tbi | 374.93 KB | 794e3a031ea27a80c729a5da5937b47c |
| ENCFF948CYD.tabix.bed.gz.tbi.dvc | 110.0 B | 8d858e26cb0b9ae01ddee5d51c67f81f |
| genomic_resource.yaml | 2.76 KB | 24302f32a0a6ea75568de5b19e61a418 |
| genomic_resource_original.yaml | 2.67 KB | e04919d20ff8753211f0f4d0b72f4b00 |
| statistics/ |