| Id: | TF_ChIP-seq/ENCSR000DUP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000DUP [biosamplesummary="Homo sapiens HL-60" and target="CTCF"] |
| Description: |
status: released biological_replicates: Rep 1 summary: output_type: pseudoreplicated IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN407QSM|/analyses/ENCAN407QSM/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_not_compliant: Processed alignments file {ENCFF340ENP|/files/ENCFF340ENP/} processed by ChIP-seq ENCODE3 hg19 pipeline has 7145092 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting CTCF-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000DUP | float |
TF_ChIP-seq_ENCSR000DUP |
TF_ChIP-seq ENCSR000DUP [biosample_summary="Homo sapiens HL-60" and target="CTCF"]
|
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[2.11, 133] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF041ZEP.bed.gz | 394.45 KB | d1c0e9bedf65662ab2331dc570c36305 |
| ENCFF041ZEP.bed.gz.dvc | 100.0 B | 23dfaee473181179864e073d52d15fdb |
| ENCFF041ZEP.tabix.bed.gz | 281.33 KB | d15a8b49a57dd5ab852f32d7d095d647 |
| ENCFF041ZEP.tabix.bed.gz.dvc | 106.0 B | b2e4fa20a0fff6f8fd75b76d7ff25d7a |
| ENCFF041ZEP.tabix.bed.gz.tbi | 177.75 KB | b939b590f7469d30e44dc57b7816c26c |
| ENCFF041ZEP.tabix.bed.gz.tbi.dvc | 110.0 B | 0e882726490691d569bde0f2552449fb |
| genomic_resource.yaml | 2.05 KB | 94b733f66aa3ee6f870ed1c8850acfc2 |
| genomic_resource_original.yaml | 1.96 KB | e60b4de9abc9b55f8480b84d405a0857 |
| statistics/ |