TF_ChIP-seq_ENCSR000DPM
TF_ChIP-seq ENCSR000DPM [biosample_summary="Homo sapiens AG04450" and target="CTCF"]
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| Id: | TF_ChIP-seq/ENCSR000DPM |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000DPM [biosamplesummary="Homo sapiens AG04450" and target="CTCF"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN299KLM|/analyses/ENCAN299KLM/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_internal_action: File {ENCFF788LNG|/files/ENCFF788LNG/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_warning: Processed alignments file {ENCFF811FBC|/files/ENCFF811FBC/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 15245443 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting CTCF-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF402WKZ|/files/ENCFF402WKZ/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 17584770 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting CTCF-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000DPM | float |
TF_ChIP-seq_ENCSR000DPM |
TF_ChIP-seq ENCSR000DPM [biosample_summary="Homo sapiens AG04450" and target="CTCF"]
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[4.76, 560] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF788LNG.bed.gz | 762.62 KB | 7f6723cd4f6db91cb57c8c40b6d5cb6d |
| ENCFF788LNG.bed.gz.dvc | 100.0 B | 537cb6c1e6cffe4a11e78bae45b4f2c9 |
| ENCFF788LNG.tabix.bed.gz | 578.55 KB | fcab33b1e711c42589155d3745e1eef4 |
| ENCFF788LNG.tabix.bed.gz.dvc | 106.0 B | baff9d8ab43aef66f93c30c9151289ea |
| ENCFF788LNG.tabix.bed.gz.tbi | 296.52 KB | f96c7c8ebfd2c7b2d48d53bf3eb75bc2 |
| ENCFF788LNG.tabix.bed.gz.tbi.dvc | 110.0 B | 11dbb45621ab405bccc247c56a0e22a6 |
| genomic_resource.yaml | 2.73 KB | ee6cd49556cc286928d5947cd6f54bb2 |
| genomic_resource_original.yaml | 2.63 KB | b459971122abe15c83172a7f067deec8 |
| statistics/ |