TF_ChIP-seq_ENCSR000BTK
TF_ChIP-seq ENCSR000BTK [biosample_summary="Homo sapiens HL-60" and target="GABPA"]
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| Id: | TF_ChIP-seq/ENCSR000BTK |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000BTK [biosamplesummary="Homo sapiens HL-60" and target="GABPA"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN520VJA|/analyses/ENCAN520VJA/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Processed alignments file {ENCFF704SGZ|/files/ENCFF704SGZ/} processed by ChIP-seq ENCODE3 hg19 pipeline has 16497679 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting GABPA-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF839FNS|/files/ENCFF839FNS/} processed by ChIP-seq ENCODE3 hg19 pipeline has 18946253 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting GABPA-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BTK | float |
TF_ChIP-seq_ENCSR000BTK |
TF_ChIP-seq ENCSR000BTK [biosample_summary="Homo sapiens HL-60" and target="GABPA"]
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[5.82, 815] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF280GDT.bed.gz | 161.56 KB | 703045c5651246291956c1efe81a8e2e |
| ENCFF280GDT.bed.gz.dvc | 100.0 B | 217165ff53e944fe714fcca435371190 |
| ENCFF280GDT.tabix.bed.gz | 117.14 KB | f14e8f955d47bcc630ef2c332bae1f2a |
| ENCFF280GDT.tabix.bed.gz.dvc | 106.0 B | 60f4a9ba133b3e199dc068e95e1c5adc |
| ENCFF280GDT.tabix.bed.gz.tbi | 76.26 KB | 6b10d9cefceced0b70f133db4bf17b8d |
| ENCFF280GDT.tabix.bed.gz.tbi.dvc | 109.0 B | 0ab50be1a7558ad0be520bbd78bf68af |
| genomic_resource.yaml | 2.33 KB | d9c2d472606029a3344e7b2fbb36eaac |
| genomic_resource_original.yaml | 2.24 KB | 22673145a5ba85241347fbe32fbabf8f |
| statistics/ |