TF_ChIP-seq_ENCSR000BGE
TF_ChIP-seq ENCSR000BGE [biosample_summary="Homo sapiens GM12878" and target="SRF"]
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| Id: | TF_ChIP-seq/ENCSR000BGE |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR000BGE [biosamplesummary="Homo sapiens GM12878" and target="SRF"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN776BQG|/analyses/ENCAN776BQG/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_internal_action: File {ENCFF182IFE|/files/ENCFF182IFE/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_warning: Processed alignments file {ENCFF263NOT|/files/ENCFF263NOT/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 16056093 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting SRF-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF731ZNW|/files/ENCFF731ZNW/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 16181923 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting SRF-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BGE | float |
TF_ChIP-seq_ENCSR000BGE |
TF_ChIP-seq ENCSR000BGE [biosample_summary="Homo sapiens GM12878" and target="SRF"]
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[4.76, 524] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF182IFE.bed.gz | 54.2 KB | ff130149520ea9b718f987e52d3e4370 |
| ENCFF182IFE.bed.gz.dvc | 99.0 B | df0d5036e2fd274eb556878fcb426ee8 |
| ENCFF182IFE.tabix.bed.gz | 37.72 KB | dee0ca25ba6b290989181923fd7f68cc |
| ENCFF182IFE.tabix.bed.gz.dvc | 105.0 B | f6d09c55d2656c6735f53c4e9605fa7b |
| ENCFF182IFE.tabix.bed.gz.tbi | 33.82 KB | 75b464b5b859be2875990e0efdf9c03f |
| ENCFF182IFE.tabix.bed.gz.tbi.dvc | 109.0 B | 35615b926f9f828a55fb7828d9c679c9 |
| genomic_resource.yaml | 2.74 KB | 2903a4dcbd12ac877bc1c1deb0f0e90c |
| genomic_resource_original.yaml | 2.64 KB | 542188a7aba7a44775b91edc26d5a663 |
| statistics/ |