Histone_ChIP-seq_ENCSR157FDN
Histone_ChIP-seq ENCSR157FDN [biosample_summary="Homo sapiens large intestine tissue male embryo (108 days)" and target="H3K27me3"]
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| Id: | Histone_ChIP-seq/ENCSR157FDN |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR157FDN [biosamplesummary="Homo sapiens large intestine tissue male embryo (108 days)" and target="H3K27me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: male embryo (108 days) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN682KJR|/analyses/ENCAN682KJR/} has in progress subobject document {c938961a-3645-495c-b6c3-1f8a74f17539|/documents/c938961a-3645-495c-b6c3-1f8a74f17539/} audit_internal_action: Released analysis {ENCAN682KJR|/analyses/ENCAN682KJR/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF432AOX|/files/ENCFF432AOX/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 24898731 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF010MHN|/files/ENCFF010MHN/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 19147236 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR157FDN | float |
Histone_ChIP-seq_ENCSR157FDN |
Histone_ChIP-seq ENCSR157FDN [biosample_summary="Homo sapiens large intestine tissue male embryo (108 days)" and target="H3K27me3"]
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[1.8, 31.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF459CYV.bed.gz | 1.43 MB | 752c962c024048db1725ad9bb05a0943 |
| ENCFF459CYV.bed.gz.dvc | 101.0 B | 8d5c4db315298f5161f01d552a80e678 |
| ENCFF459CYV.tabix.bed.gz | 736.93 KB | f78df3dc455403067056917f605aba3f |
| ENCFF459CYV.tabix.bed.gz.dvc | 106.0 B | a438aa46e673515916e9fad7aefdccb0 |
| ENCFF459CYV.tabix.bed.gz.tbi | 176.28 KB | ebe55f92c702dc5ba90b63394f8663e3 |
| ENCFF459CYV.tabix.bed.gz.tbi.dvc | 110.0 B | 5a262dac104a77b30ea3e9ed61b4fd23 |
| genomic_resource.yaml | 2.72 KB | 285f3c1020586ff8ab3cf50f5d7b9737 |
| genomic_resource_original.yaml | 2.57 KB | 1545f52007afdb7bb961663895a3b13a |
| statistics/ |