type: position_score
table:
  filename: ENCFF459CYV.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR157FDN
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ChIP-seq ENCSR157FDN [TISSUE: Homo sapiens large intestine tissue male
    embryo (108 days), TARGET: H3K27me3]'
  description: '**status**: released


    **biological\_replicates**: Rep 1, Rep 2


    **summary**: male embryo (108 days)


    **output\_type**: pseudoreplicated peaks


    **audit\_internal\_action**: Released analysis {ENCAN682KJR|/analyses/ENCAN682KJR/}
    has in progress subobject document {c938961a-3645-495c-b6c3-1f8a74f17539|/documents/c938961a-3645-495c-b6c3-1f8a74f17539/}


    **audit\_internal\_action**: Released analysis {ENCAN682KJR|/analyses/ENCAN682KJR/}
    has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/}


    **audit\_not\_compliant**: Processed alignments file {ENCFF432AOX|/files/ENCFF432AOX/}
    processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 24898731 usable fragments.
    The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments.
    The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/})


    **audit\_not\_compliant**: Processed alignments file {ENCFF010MHN|/files/ENCFF010MHN/}
    processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 19147236 usable fragments.
    The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments.
    The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/})'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR157FDN
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: male embryo (108 days)
    biosample_summary: Homo sapiens large intestine tissue male embryo (108 days)
    replication_type: isogenic
    biosample_ontology: /biosample-types/tissue_UBERON_0000059/
    perturbed: false
    doi: 10.17989/ENCSR157FDN
    date_created: '2015-09-16T21:42:17.884004+00:00'
    date_released: '2013-07-31'
    submitter_comment: ''
    target: H3K27me3
