Histone_ChIP-seq_ENCSR146KXZ
Histone_ChIP-seq ENCSR146KXZ [biosample_summary="Homo sapiens brain tissue female embryo (17 weeks)" and target="H3K9me3"]
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| Id: | Histone_ChIP-seq/ENCSR146KXZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR146KXZ [biosamplesummary="Homo sapiens brain tissue female embryo (17 weeks)" and target="H3K9me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female embryo (17 weeks) output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN862QAL|/analyses/ENCAN862QAL/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed redacted unfiltered alignments file {ENCFF124ZTO|/files/ENCFF124ZTO/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 28228671 mapped reads. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated as a broad histone mark is 35 million mapped reads. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed redacted unfiltered alignments file {ENCFF570PRJ|/files/ENCFF570PRJ/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 33263212 mapped reads. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human and investigated as a broad histone mark is 35 million mapped reads. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR146KXZ | float |
Histone_ChIP-seq_ENCSR146KXZ |
Histone_ChIP-seq ENCSR146KXZ [biosample_summary="Homo sapiens brain tissue female embryo (17 weeks)" and target="H3K9me3"]
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[1.21, 34.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF626JFL.bed.gz | 2.23 MB | 611a677406996edae87099a482f8acb1 |
| ENCFF626JFL.bed.gz.dvc | 101.0 B | 4b1f5b002a26001dd0891bc011c84a25 |
| ENCFF626JFL.tabix.bed.gz | 1.15 MB | 13b90098fad4bbffc85b3ad9433c1f80 |
| ENCFF626JFL.tabix.bed.gz.dvc | 107.0 B | b18ade2c6a0f1ac8c8bb0b90abd20b61 |
| ENCFF626JFL.tabix.bed.gz.tbi | 355.5 KB | 2a9dc7b3196197292f7679da886c25c0 |
| ENCFF626JFL.tabix.bed.gz.tbi.dvc | 110.0 B | ef7d2f5ac1825c8fd6490b67202e43e0 |
| genomic_resource.yaml | 2.49 KB | 4cb217080d8f7adf5c4b9c159e84c442 |
| genomic_resource_original.yaml | 2.35 KB | 312c3b3de840631ee290d613c35dcaa2 |
| statistics/ |