type: position_score
table:
  filename: ENCFF626JFL.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR146KXZ
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR146KXZ [biosample_summary="Homo sapiens brain tissue female embryo (17 weeks)" and target="H3K9me3"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR146KXZ [biosample_summary="Homo sapiens brain tissue female embryo (17 weeks)" and target="H3K9me3"]'
  description: '**status**: released


    **biological\_replicates**: Rep 1, Rep 2


    **summary**: female embryo (17 weeks)


    **output\_type**: replicated peaks


    **audit\_internal\_action**: Archived analysis {ENCAN862QAL|/analyses/ENCAN862QAL/}
    has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/}


    **audit\_not\_compliant**: Processed redacted unfiltered alignments file {ENCFF124ZTO|/files/ENCFF124ZTO/}
    processed by ChIP-seq ENCODE3 GRCh38 pipeline has 28228671 mapped reads. The minimum
    ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human
    and investigated as a broad histone mark is 35 million mapped reads. The recommended
    value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data
    standards|/data-standards/chip-seq/})


    **audit\_not\_compliant**: Processed redacted unfiltered alignments file {ENCFF570PRJ|/files/ENCFF570PRJ/}
    processed by ChIP-seq ENCODE3 GRCh38 pipeline has 33263212 mapped reads. The minimum
    ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me3-human
    and investigated as a broad histone mark is 35 million mapped reads. The recommended
    value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data
    standards|/data-standards/chip-seq/})'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR146KXZ
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: female embryo (17 weeks)
    biosample_summary: Homo sapiens brain tissue female embryo (17 weeks)
    replication_type: anisogenic
    biosample_ontology: /biosample-types/tissue_UBERON_0000955/
    perturbed: false
    doi: 10.17989/ENCSR146KXZ
    date_created: '2015-09-15T20:27:34.177125+00:00'
    date_released: '2013-07-31'
    submitter_comment: ''
    target: H3K9me3
