Histone_ChIP-seq_ENCSR113FMX
Histone_ChIP-seq ENCSR113FMX [biosample_summary="Homo sapiens T-cell" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR113FMX |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR113FMX [biosamplesummary="Homo sapiens T-cell" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_error: Processed redacted alignments file {ENCFF504BDF|/files/ENCFF504BDF/} processed by ChIP-seq ENCODE4 v1.7.0 GRCh38 pipeline has 4029431 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_internal_action: Released analysis {ENCAN453FQE|/analyses/ENCAN453FQE/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed redacted alignments file {ENCFF280QBS|/files/ENCFF280QBS/} processed by ChIP-seq ENCODE4 v1.7.0 GRCh38 pipeline has 7641027 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR113FMX | float |
Histone_ChIP-seq_ENCSR113FMX |
Histone_ChIP-seq ENCSR113FMX [biosample_summary="Homo sapiens T-cell" and target="H3K4me1"]
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[2.1, 20.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF598AFF.bed.gz | 1.75 MB | 17130fab9376cfa156dbf4956f8b59b5 |
| ENCFF598AFF.bed.gz.dvc | 101.0 B | ecb105f26e69eadf1bd50fbc78a76133 |
| ENCFF598AFF.tabix.bed.gz | 955.81 KB | 49c26df33a336450a035eac8db86c3a4 |
| ENCFF598AFF.tabix.bed.gz.dvc | 106.0 B | 1bf88b13e4514fcccf65f7f4271cd954 |
| ENCFF598AFF.tabix.bed.gz.tbi | 231.3 KB | c14d0fa094d279b617c3dfe73addd191 |
| ENCFF598AFF.tabix.bed.gz.tbi.dvc | 110.0 B | 5ec296af5e99e861d24ea95ac237d1e3 |
| genomic_resource.yaml | 2.47 KB | 7cc3f98f9f02b5b484831fe8cba8d75a |
| genomic_resource_original.yaml | 2.36 KB | 78bdde9d2c1a11e1926b7e7b84e41be1 |
| statistics/ |