Histone_ChIP-seq_ENCSR000ART
Histone_ChIP-seq ENCSR000ART [biosample_summary="Homo sapiens astrocyte" and target="H3K9ac"]
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| Id: | Histone_ChIP-seq/ENCSR000ART |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ART [biosamplesummary="Homo sapiens astrocyte" and target="H3K9ac"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN294BMJ|/analyses/ENCAN294BMJ/} has in progress subobject document {f8cfe1a1-e86b-43ed-93af-489e0beaab00|/documents/f8cfe1a1-e86b-43ed-93af-489e0beaab00/} audit_internal_action: Released analysis {ENCAN294BMJ|/analyses/ENCAN294BMJ/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF214IIW|/files/ENCFF214IIW/} processed by ChIP-seq ENCODE4 v1.6.0 GRCh38 pipeline was generated from a library with PBC1 value of 0.89. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ART | float |
Histone_ChIP-seq_ENCSR000ART |
Histone_ChIP-seq ENCSR000ART [biosample_summary="Homo sapiens astrocyte" and target="H3K9ac"]
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[1.67, 83.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF649IVK.bed.gz | 1.7 MB | a0f084f24f4ac4246302f5f365a07883 |
| ENCFF649IVK.bed.gz.dvc | 101.0 B | 2c5c3f518582df9bb0660a3ef3792f75 |
| ENCFF649IVK.tabix.bed.gz | 719.6 KB | edf35777d234c6981acd636f2c28a1a0 |
| ENCFF649IVK.tabix.bed.gz.dvc | 106.0 B | 2c91f57dfa15aed1755a0da383e204e2 |
| ENCFF649IVK.tabix.bed.gz.tbi | 251.71 KB | ad201167a6fe8d38bb2b2b4c5194f70b |
| ENCFF649IVK.tabix.bed.gz.tbi.dvc | 110.0 B | 461d0b6a974762980027d06270a28cfc |
| genomic_resource.yaml | 2.27 KB | efcc76e3f26e5071c759822ddbda853c |
| genomic_resource_original.yaml | 2.16 KB | efe74dfec1b4b4d0d7c8a66e7e42291f |
| statistics/ |