Histone_ChIP-seq_ENCSR000AMK
Histone_ChIP-seq ENCSR000AMK [biosample_summary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K4me2"]
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| Id: | Histone_ChIP-seq/ENCSR000AMK |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AMK [biosamplesummary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K4me2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female adult (50 years) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN160DNV|/analyses/ENCAN160DNV/} has in progress subobject document {d2b5a8e1-ec0d-4d91-93fa-2154bb9bdc86|/documents/d2b5a8e1-ec0d-4d91-93fa-2154bb9bdc86/} audit_internal_action: Released analysis {ENCAN160DNV|/analyses/ENCAN160DNV/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF939OQQ|/files/ENCFF939OQQ/} processed by ChIP-seq ENCODE4 v1.6.0 GRCh38 pipeline has 9293244 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me2-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_warning: Processed alignments file {ENCFF087ZXP|/files/ENCFF087ZXP/} processed by ChIP-seq ENCODE4 v1.6.0 GRCh38 pipeline has 13810008 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me2-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AMK | float |
Histone_ChIP-seq_ENCSR000AMK |
Histone_ChIP-seq ENCSR000AMK [biosample_summary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K4me2"]
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[1.96, 47.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF787CWV.bed.gz | 2.27 MB | 66eb74d523b575d7a9dda89ff2550675 |
| ENCFF787CWV.bed.gz.dvc | 101.0 B | 41427dba128040d0246b4ee6222c4bae |
| ENCFF787CWV.tabix.bed.gz | 1005.61 KB | 69139f1ff3ae9669b1465a1ff2aed6b1 |
| ENCFF787CWV.tabix.bed.gz.dvc | 107.0 B | e50faed747e893147756f0b61eb27636 |
| ENCFF787CWV.tabix.bed.gz.tbi | 340.14 KB | 1a8bfceab7ce6e978b167c90505a484c |
| ENCFF787CWV.tabix.bed.gz.tbi.dvc | 110.0 B | aa794dc0fa2a8d640d8a94ff4b4be864 |
| genomic_resource.yaml | 2.71 KB | 6032ed32dc5e1df71213bad4c81c4c07 |
| genomic_resource_original.yaml | 2.57 KB | 7c554e7da1624c9003fbe0e936e2db68 |
| statistics/ |