Histone_ChIP-seq_ENCSR000AKE
Histone_ChIP-seq ENCSR000AKE [biosample_summary="Homo sapiens GM12878" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR000AKE |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AKE [biosamplesummary="Homo sapiens GM12878" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN833AYF|/analyses/ENCAN833AYF/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF926HQH|/files/ENCFF926HQH/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 9476652 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF297QVO|/files/ENCFF297QVO/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 7962756 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AKE | float |
Histone_ChIP-seq_ENCSR000AKE |
Histone_ChIP-seq ENCSR000AKE [biosample_summary="Homo sapiens GM12878" and target="H3K36me3"]
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[1.93, 10.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF674TVF.bed.gz | 1.84 MB | f4a6f044532459ce481964fa20ab0270 |
| ENCFF674TVF.bed.gz.dvc | 101.0 B | 37335b5edaec07a339349503f400b345 |
| ENCFF674TVF.tabix.bed.gz | 1019.83 KB | 34bce4a5670841b136ff177509afb9e9 |
| ENCFF674TVF.tabix.bed.gz.dvc | 107.0 B | bad052a1f0ac1ae89bf955f691457146 |
| ENCFF674TVF.tabix.bed.gz.tbi | 167.87 KB | b9960f8bedf0d09079b3af6083219e7e |
| ENCFF674TVF.tabix.bed.gz.tbi.dvc | 110.0 B | f3d564c5bd52ba7fab29ce2d83784a7a |
| genomic_resource.yaml | 2.52 KB | d864a740c414fca833074e199c804f24 |
| genomic_resource_original.yaml | 2.41 KB | d7a2b609ebe3a5f3a9913500ca884e7a |
| statistics/ |