type: position_score
table:
  filename: ENCFF674TVF.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR000AKE
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR000AKE [biosample_summary="Homo sapiens GM12878" and target="H3K36me3"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR000AKE [biosample_summary="Homo sapiens GM12878" and target="H3K36me3"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: replicated peaks\n\n**audit\\_internal\\\
    _action**: Archived analysis {ENCAN833AYF|/analyses/ENCAN833AYF/} has in progress\
    \ subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/}\n\
    \n**audit\\_not\\_compliant**: Processed alignments file {ENCFF926HQH|/files/ENCFF926HQH/}\
    \ processed by ChIP-seq ENCODE3 GRCh38 pipeline has 9476652 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K36me3-human and investigated as a broad histone mark is 20 million usable\
    \ fragments. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})\n\n**audit\\\
    _not\\_compliant**: Processed alignments file {ENCFF297QVO|/files/ENCFF297QVO/}\
    \ processed by ChIP-seq ENCODE3 GRCh38 pipeline has 7962756 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K36me3-human and investigated as a broad histone mark is 20 million usable\
    \ fragments. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000AKE
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens GM12878
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0002784/
    perturbed: false
    doi: 10.17989/ENCSR000AKE
    date_created: '2013-11-07T22:16:14.694569+00:00'
    date_released: '2011-02-10'
    submitter_comment: 'Fastq file ENCFF000ATN contains reads of mixed lengths; read
      lengths followed by respective number of reads: (47, 11171766), (51, 11185435)'
    target: H3K36me3
