type: position_score
table:
  filename: ENCFF888SGX.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: TF_ChIP-seq_ENCSR994YLZ
  column_index: 3
  type: float
  desc: 'TF_ChIP-seq ENCSR994YLZ [biosample_summary="Homo sapiens liver tissue female child (4 years)" and target="YY1"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'TF_ChIP-seq ENCSR994YLZ [biosample_summary="Homo sapiens liver tissue female child (4 years)" and target="YY1"]'
  description: '**status**: released


    **biological\_replicates**: Rep 1, Rep 2


    **summary**: female child (4 years)


    **output\_type**: IDR thresholded peaks


    **audit\_internal\_action**: Released analysis {ENCAN174VRA|/analyses/ENCAN174VRA/}
    has in progress subobject document {d09f3e45-fc2f-44c1-94f7-24c2f6b5f854|/documents/d09f3e45-fc2f-44c1-94f7-24c2f6b5f854/}


    **audit\_internal\_action**: Released analysis {ENCAN174VRA|/analyses/ENCAN174VRA/}
    has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/}


    **audit\_warning**: Processed alignments file {ENCFF175URP|/files/ENCFF175URP/}
    processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 17587498 usable fragments.
    The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    YY1-human and investigated as a transcription factor is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/} )'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR994YLZ
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: female child (4 years)
    biosample_summary: Homo sapiens liver tissue female child (4 years)
    replication_type: isogenic
    biosample_ontology: /biosample-types/tissue_UBERON_0002107/
    perturbed: false
    doi: 10.17989/ENCSR994YLZ
    date_created: '2015-09-29T16:18:52.120349+00:00'
    date_released: '2016-03-31'
    submitter_comment: ''
    target: YY1
