TF_ChIP-seq_ENCSR976TBC
TF_ChIP-seq ENCSR976TBC [biosample_summary="Homo sapiens GM12878" and target="IRF5"]
×
| Id: | TF_ChIP-seq/ENCSR976TBC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR976TBC [biosamplesummary="Homo sapiens GM12878" and target="IRF5"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN621ENL|/analyses/ENCAN621ENL/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF733VCH|/files/ENCFF733VCH/}, {ENCFF681WHN|/files/ENCFF681WHN/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 1.68 and a self consistency ratio of 2.09. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF127WGD|/files/ENCFF127WGD/}, {ENCFF100ERQ|/files/ENCFF100ERQ/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 1.68 and a self consistency ratio of 2.09. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR976TBC | float |
TF_ChIP-seq_ENCSR976TBC |
TF_ChIP-seq ENCSR976TBC [biosample_summary="Homo sapiens GM12878" and target="IRF5"]
|
|
[11.1, 2.98e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF100ERQ.bed.gz | 49.45 KB | bfa6493ee2202e459c7ae5dd5a054be9 |
| ENCFF100ERQ.bed.gz.dvc | 99.0 B | 99521a5d81476f4a68e680c000ec899e |
| ENCFF100ERQ.tabix.bed.gz | 32.27 KB | b0bcea6dc88c80bc6d7bde4f80d6cc02 |
| ENCFF100ERQ.tabix.bed.gz.dvc | 105.0 B | 35bb7ae08d04bb9305af3fe6c9b58fa2 |
| ENCFF100ERQ.tabix.bed.gz.tbi | 29.5 KB | 01f580bbbedb9dc45c8a3f561c7a2a8f |
| ENCFF100ERQ.tabix.bed.gz.tbi.dvc | 109.0 B | 4382d79d0882ad140ffed949b049162e |
| genomic_resource.yaml | 2.6 KB | b069eb1838a0428c21737bd46495f187 |
| genomic_resource_original.yaml | 2.5 KB | 5fd8eb88c349665641748752f6aae6f0 |
| statistics/ |