TF_ChIP-seq_ENCSR959COF
TF_ChIP-seq ENCSR959COF [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB10" and target="ZBTB10"]
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| Id: | TF_ChIP-seq/ENCSR959COF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR959COF [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB10" and target="ZBTB10"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB10 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN950WZW|/analyses/ENCAN950WZW/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_internal_action: Released analysis {ENCAN950WZW|/analyses/ENCAN950WZW/} has in progress subobject document {d0d2c780-f0c4-4b37-8d14-693eabd3f496|/documents/d0d2c780-f0c4-4b37-8d14-693eabd3f496/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF825GVH|/files/ENCFF825GVH/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.37 and a self consistency ratio of 3.14. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF916WXO|/files/ENCFF916WXO/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.37 and a self consistency ratio of 3.14. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR959COF | float |
TF_ChIP-seq_ENCSR959COF |
TF_ChIP-seq ENCSR959COF [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB10" and target="ZBTB10"]
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[7.94, 411] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF825GVH.bed.gz | 215.22 KB | c31002e42ec51e4e8efedd157a34cecc |
| ENCFF825GVH.bed.gz.dvc | 100.0 B | 00878e998e72711dd4b1c7b94000bec9 |
| ENCFF825GVH.tabix.bed.gz | 161.76 KB | 964549cfd192e86530ada5c7a361e7ab |
| ENCFF825GVH.tabix.bed.gz.dvc | 106.0 B | 3edf00ca77c6a9e7b1bf3fa2c9222d3f |
| ENCFF825GVH.tabix.bed.gz.tbi | 77.4 KB | 12ec4614bafcb25029a4dd08f696b9c3 |
| ENCFF825GVH.tabix.bed.gz.tbi.dvc | 109.0 B | 8968dbee0f682b96e3616773e588dc93 |
| genomic_resource.yaml | 2.96 KB | 3c9fe55d2ccb0834b8e040aaf4a99566 |
| genomic_resource_original.yaml | 2.79 KB | 16329d9b5afbac333ee123459cdd1bc6 |
| statistics/ |