TF_ChIP-seq_ENCSR953MMC
TF_ChIP-seq ENCSR953MMC [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZC3H4" and target="ZC3H4"]
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| Id: | TF_ChIP-seq/ENCSR953MMC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR953MMC [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZC3H4" and target="ZC3H4"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZC3H4 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN250CVY|/analyses/ENCAN250CVY/} has in progress subobject document {8d7619f3-b320-4038-91e4-c3790f12f500|/documents/8d7619f3-b320-4038-91e4-c3790f12f500/} audit_internal_action: Released analysis {ENCAN250CVY|/analyses/ENCAN250CVY/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF847EOB|/files/ENCFF847EOB/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.50 and a self consistency ratio of 2.27. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF603QUY|/files/ENCFF603QUY/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.50 and a self consistency ratio of 2.27. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR953MMC | float |
TF_ChIP-seq_ENCSR953MMC |
TF_ChIP-seq ENCSR953MMC [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZC3H4" and target="ZC3H4"]
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[7.6, 299] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF847EOB.bed.gz | 126.45 KB | 73b80a333f3f72a2a664683b4a01421b |
| ENCFF847EOB.bed.gz.dvc | 100.0 B | 618a3cb779df2fc3ca8e506eaf5a675e |
| ENCFF847EOB.tabix.bed.gz | 96.06 KB | af4ac9d58c9cc7ef0224a37e2cfd6390 |
| ENCFF847EOB.tabix.bed.gz.dvc | 105.0 B | 561e4c8dcb5250ddff5f958a9fb8fa71 |
| ENCFF847EOB.tabix.bed.gz.tbi | 45.21 KB | 738441970d0d5e6524f3b07e701f5686 |
| ENCFF847EOB.tabix.bed.gz.tbi.dvc | 109.0 B | ed953672269bd4534cb75153d670ce62 |
| genomic_resource.yaml | 2.95 KB | 699b15de702f88a061ea179d64fd2bf8 |
| genomic_resource_original.yaml | 2.79 KB | bff952477b1f28a44bbf2d7db6115bb9 |
| statistics/ |