TF_ChIP-seq_ENCSR948KMB
TF_ChIP-seq ENCSR948KMB [biosample_summary="Homo sapiens K562" and target="PTBP1"]
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| Id: | TF_ChIP-seq/ENCSR948KMB |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR948KMB [biosamplesummary="Homo sapiens K562" and target="PTBP1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Released analysis {ENCAN427WFN|/analyses/ENCAN427WFN/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Processed alignments file {ENCFF174JQR|/files/ENCFF174JQR/} processed by ChIP-seq ENCODE3 hg19 pipeline has 10456590 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting PTBP1-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) audit_warning: Processed alignments file {ENCFF455VOE|/files/ENCFF455VOE/} processed by ChIP-seq ENCODE3 hg19 pipeline has 10359235 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting PTBP1-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR948KMB | float |
TF_ChIP-seq_ENCSR948KMB |
TF_ChIP-seq ENCSR948KMB [biosample_summary="Homo sapiens K562" and target="PTBP1"]
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[3.81, 769] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF694BIA.bed.gz | 84.39 KB | 72a8e93e6ddf058b52d390f325564e50 |
| ENCFF694BIA.bed.gz.dvc | 99.0 B | 6e8bb219b3cda530d98403a00e621cf6 |
| ENCFF694BIA.tabix.bed.gz | 66.24 KB | a1462939dacdac4b3b1e807613620602 |
| ENCFF694BIA.tabix.bed.gz.dvc | 105.0 B | 0d0fc2d9c6dbb152f22c21bace2b8783 |
| ENCFF694BIA.tabix.bed.gz.tbi | 38.49 KB | 61ec3a09f7c6074c5e6f1e0b2d402b12 |
| ENCFF694BIA.tabix.bed.gz.tbi.dvc | 109.0 B | 9c7e67ba2a5e48635a8bb55c6aa9090b |
| genomic_resource.yaml | 2.33 KB | 6d7ea635b5276f698743e7c0245814a6 |
| genomic_resource_original.yaml | 2.23 KB | 3151fec68e8257a03a762e517925d2fa |
| statistics/ |