type: position_score
table:
  filename: ENCFF238OFT.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: TF_ChIP-seq_ENCSR919CZU
  column_index: 3
  type: float
  desc: 'TF_ChIP-seq ENCSR919CZU [biosample_summary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens EGR2" and target="EGR2"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'TF_ChIP-seq ENCSR919CZU [biosample_summary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens EGR2" and target="EGR2"]'
  description: '**status**: released


    **biological\_replicates**: Rep 1, Rep 2


    **summary**: genetically modified (insertion) using site-specific recombination
    targeting H. sapiens EGR2


    **output\_type**: optimal IDR thresholded peaks


    **audit\_internal\_action**: Archived analysis {ENCAN178QET|/analyses/ENCAN178QET/}
    has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/}


    **audit\_internal\_action**: File {ENCFF238OFT|/files/ENCFF238OFT/} with status
    ''released'' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status
    ''archived''.


    **audit\_warning**: Processed alignments file {ENCFF888DOH|/files/ENCFF888DOH/}
    processed by ChIP-seq ENCODE3 GRCh38 pipeline has 12293516 usable fragments. The
    minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    EGR2-human and investigated as a transcription factor is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/} )


    **audit\_warning**: Processed alignments file {ENCFF234ALA|/files/ENCFF234ALA/}
    processed by ChIP-seq ENCODE3 GRCh38 pipeline has 10307743 usable fragments. The
    minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    EGR2-human and investigated as a transcription factor is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/} )'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR919CZU
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: genetically modified (insertion) using site-specific
      recombination targeting H. sapiens EGR2
    biosample_summary: Homo sapiens HEK293 genetically modified (insertion) using
      site-specific recombination targeting H. sapiens EGR2
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0001182/
    perturbed: false
    doi: 10.17989/ENCSR919CZU
    date_created: '2016-03-29T17:49:10.171848+00:00'
    date_released: '2016-10-07'
    submitter_comment: ''
    target: EGR2
