TF_ChIP-seq_ENCSR912NMR
TF_ChIP-seq ENCSR912NMR [biosample_summary="Homo sapiens MCF-7" and target="NONO"]
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| Id: | TF_ChIP-seq/ENCSR912NMR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR912NMR [biosamplesummary="Homo sapiens MCF-7" and target="NONO"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN436MSB|/analyses/ENCAN436MSB/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_internal_action: File {ENCFF800CDQ|/files/ENCFF800CDQ/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF800CDQ|/files/ENCFF800CDQ/}, {ENCFF647TZD|/files/ENCFF647TZD/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 2.17 and a self consistency ratio of 1.26. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF189GUO|/files/ENCFF189GUO/}, {ENCFF091NKH|/files/ENCFF091NKH/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 2.17 and a self consistency ratio of 1.26. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR912NMR | float |
TF_ChIP-seq_ENCSR912NMR |
TF_ChIP-seq ENCSR912NMR [biosample_summary="Homo sapiens MCF-7" and target="NONO"]
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[12.2, 1.8e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF800CDQ.bed.gz | 74.72 KB | 89af3c25db22c1daf39c0b22badfd330 |
| ENCFF800CDQ.bed.gz.dvc | 99.0 B | 13f9b1042f76d2ad8ed6f1a0d7e76062 |
| ENCFF800CDQ.tabix.bed.gz | 49.22 KB | 36f264c7c55c8ba12eba6b6832d4e7b7 |
| ENCFF800CDQ.tabix.bed.gz.dvc | 105.0 B | 32c91f4dd540191134f64b9137abc72c |
| ENCFF800CDQ.tabix.bed.gz.tbi | 33.81 KB | 818de9187d3fdf70ebe9c7e876e1be9e |
| ENCFF800CDQ.tabix.bed.gz.tbi.dvc | 109.0 B | cd38585a34784d397c3b2a849f8c31f3 |
| genomic_resource.yaml | 2.66 KB | 19218a9446c74b096df4ee0c616df20f |
| genomic_resource_original.yaml | 2.57 KB | 5448b511c030b7d215774edb657f61d7 |
| statistics/ |