TF_ChIP-seq_ENCSR894SXR
TF_ChIP-seq ENCSR894SXR [biosample_summary="Homo sapiens HepG2" and target="TCF12"]
×
| Id: | TF_ChIP-seq/ENCSR894SXR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR894SXR [biosamplesummary="Homo sapiens HepG2" and target="TCF12"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN103IFB|/analyses/ENCAN103IFB/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF949EAE|/files/ENCFF949EAE/}, {ENCFF606PZE|/files/ENCFF606PZE/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.18 and a self consistency ratio of 1.18. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF946JDP|/files/ENCFF946JDP/}, {ENCFF423UQI|/files/ENCFF423UQI/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.18 and a self consistency ratio of 1.18. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR894SXR | float |
TF_ChIP-seq_ENCSR894SXR |
TF_ChIP-seq ENCSR894SXR [biosample_summary="Homo sapiens HepG2" and target="TCF12"]
|
|
[16.4, 538] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF949EAE.bed.gz | 5.57 KB | ce4bb6cb1145b13af954783f501088d3 |
| ENCFF949EAE.bed.gz.dvc | 98.0 B | 36d03bb290b8c0ac7e66d9be3c870632 |
| ENCFF949EAE.tabix.bed.gz | 3.32 KB | 084446ffe6754775dc4b3ef6f4f324c8 |
| ENCFF949EAE.tabix.bed.gz.dvc | 104.0 B | 85a894ac8e3badc90c7d92c51d44c3eb |
| ENCFF949EAE.tabix.bed.gz.tbi | 5.36 KB | d16a1e7947911fba815b5aea540ef7f4 |
| ENCFF949EAE.tabix.bed.gz.tbi.dvc | 108.0 B | 6782fa921243d6bb34201c2dae06e74b |
| genomic_resource.yaml | 2.47 KB | 2cb7540cd69f7f53af1512664089f184 |
| genomic_resource_original.yaml | 2.38 KB | 61a9d6ecf9e559774849d847be5038ee |
| statistics/ |