| Id: | TF_ChIP-seq/ENCSR893WSB |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR893WSB [biosamplesummary="Homo sapiens K562" and target="HDAC2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN861XXQ|/analyses/ENCAN861XXQ/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_internal_action: Released analysis {ENCAN861XXQ|/analyses/ENCAN861XXQ/} has in progress subobject document {672b77ec-6cd4-4c25-a541-9fc3db642fe7|/documents/672b77ec-6cd4-4c25-a541-9fc3db642fe7/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF150FJT|/files/ENCFF150FJT/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline have a rescue ratio of 1.34 and a self consistency ratio of 2.56. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR893WSB | float |
TF_ChIP-seq_ENCSR893WSB |
TF_ChIP-seq ENCSR893WSB [biosample_summary="Homo sapiens K562" and target="HDAC2"]
|
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[14.6, 4.63e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF150FJT.bed.gz | 650.08 KB | 9356283b620a9b5bc79ba98ef9a5251c |
| ENCFF150FJT.bed.gz.dvc | 100.0 B | da4d0ab43acda82b5de115577ebc7759 |
| ENCFF150FJT.tabix.bed.gz | 470.91 KB | d978ca5573c7a617aa4c989e9a9c1ddd |
| ENCFF150FJT.tabix.bed.gz.dvc | 106.0 B | 42a531c6f5d495e58df2e9ff92af90e5 |
| ENCFF150FJT.tabix.bed.gz.tbi | 177.21 KB | a6c824476c76e45ca863e57ac8582199 |
| ENCFF150FJT.tabix.bed.gz.tbi.dvc | 110.0 B | 26a9d1d9a8528609b2785c04ea7c2580 |
| genomic_resource.yaml | 2.64 KB | db447a39df9897ac5919ff5da6909d4c |
| genomic_resource_original.yaml | 2.55 KB | 561670d42c1e13e08c3409beb4fe9752 |
| statistics/ |