TF_ChIP-seq_ENCSR863HZM
TF_ChIP-seq ENCSR863HZM [biosample_summary="Homo sapiens lower lobe of right lung tissue male adult (60 years)" and target="CTCF"]
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| Id: | TF_ChIP-seq/ENCSR863HZM |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR863HZM [biosamplesummary="Homo sapiens lower lobe of right lung tissue male adult (60 years)" and target="CTCF"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (60 years) output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN646MII|/analyses/ENCAN646MII/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF541FBF|/files/ENCFF541FBF/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline was generated from a library with PBC1 value of 0.90. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR863HZM | float |
TF_ChIP-seq_ENCSR863HZM |
TF_ChIP-seq ENCSR863HZM [biosample_summary="Homo sapiens lower lobe of right lung tissue male adult (60 years)" and target="CTCF"]
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[5.16, 480] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF183WDD.bed.gz | 669.0 KB | f8be00df252eaa8bcb39f0c384d268b1 |
| ENCFF183WDD.bed.gz.dvc | 100.0 B | 74e0df8902aff2b58450e70f6d866133 |
| ENCFF183WDD.tabix.bed.gz | 483.86 KB | e3118e15e7092516da760bac45b8a877 |
| ENCFF183WDD.tabix.bed.gz.dvc | 106.0 B | f5773bb8d066050e5a68bd1b25a7f9a4 |
| ENCFF183WDD.tabix.bed.gz.tbi | 246.12 KB | 34ee6c33c938492c90d4e2bef0633138 |
| ENCFF183WDD.tabix.bed.gz.tbi.dvc | 110.0 B | 94f00ed65288546697895953b526a571 |
| genomic_resource.yaml | 2.16 KB | 6a8b6c04a0518a7369ce261320f44710 |
| genomic_resource_original.yaml | 2.02 KB | b0d8252779e7b993884b0d5726a0113e |
| statistics/ |