TF_ChIP-seq_ENCSR837OOH
TF_ChIP-seq ENCSR837OOH [biosample_summary="Homo sapiens right lobe of liver tissue female child (16 years)" and target="CTCF"]
×
| Id: | TF_ChIP-seq/ENCSR837OOH |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR837OOH [biosamplesummary="Homo sapiens right lobe of liver tissue female child (16 years)" and target="CTCF"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female child (16 years) output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN555PLC|/analyses/ENCAN555PLC/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF528ICM|/files/ENCFF528ICM/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline was generated from a library with PBC1 value of 0.88. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR837OOH | float |
TF_ChIP-seq_ENCSR837OOH |
TF_ChIP-seq ENCSR837OOH [biosample_summary="Homo sapiens right lobe of liver tissue female child (16 years)" and target="CTCF"]
|
|
[5.35, 478] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF652MGY.bed.gz | 790.42 KB | 10eed105453e8179a94678c0b4f2bbd9 |
| ENCFF652MGY.bed.gz.dvc | 100.0 B | b70152ed701fc749983677585714f50d |
| ENCFF652MGY.tabix.bed.gz | 573.96 KB | 97f107715cc5002aac60a7bf592cd77b |
| ENCFF652MGY.tabix.bed.gz.dvc | 106.0 B | 9e6fe7c6fe5a75c6110d1b9fa98d52c8 |
| ENCFF652MGY.tabix.bed.gz.tbi | 290.7 KB | dea465dba2b9d4f2bbf5feabfacae98b |
| ENCFF652MGY.tabix.bed.gz.tbi.dvc | 110.0 B | d10da0619e15659658e36d2779aee4bc |
| genomic_resource.yaml | 2.14 KB | 7a2456f03389caf2ede650a85f2d718d |
| genomic_resource_original.yaml | 2.01 KB | fd0fc6068cb2785ee9142abecdfa125e |
| statistics/ |