| Id: | TF_ChIP-seq/ENCSR808FFI |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR808FFI [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZKSCAN8" and target="ZKSCAN8"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZKSCAN8 output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN765ULF|/analyses/ENCAN765ULF/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_internal_action: File {ENCFF024QKK|/files/ENCFF024QKK/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF589EKK|/files/ENCFF589EKK/}, {ENCFF024QKK|/files/ENCFF024QKK/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.65 and a self consistency ratio of 3.75. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF369EVV|/files/ENCFF369EVV/}, {ENCFF252MTX|/files/ENCFF252MTX/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.65 and a self consistency ratio of 3.75. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR808FFI | float |
TF_ChIP-seq_ENCSR808FFI |
TF_ChIP-seq ENCSR808FFI [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZKSCAN8" and target="ZKSCAN8"]
|
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[8.47, 708] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF024QKK.bed.gz | 323.67 KB | cd3fc5f2be8b5af5112c49835563d005 |
| ENCFF024QKK.bed.gz.dvc | 100.0 B | aa5bd359cd4fcb44a7304b7700be2d12 |
| ENCFF024QKK.tabix.bed.gz | 252.32 KB | 9e1783430015778558c033131ad44bf7 |
| ENCFF024QKK.tabix.bed.gz.dvc | 106.0 B | 92669037736c199c78d558496382b15e |
| ENCFF024QKK.tabix.bed.gz.tbi | 112.34 KB | 1d82d0777aaa6d1eda89f5759312692a |
| ENCFF024QKK.tabix.bed.gz.tbi.dvc | 110.0 B | ee4ff5f0046f51d5e89be8ac04e005d2 |
| genomic_resource.yaml | 3.0 KB | 99a7ded7405fa5af4215f35a3c768cd4 |
| genomic_resource_original.yaml | 2.83 KB | 5987b5ffd594e440c86f709f70f07483 |
| statistics/ |