TF_ChIP-seq_ENCSR803IYP
TF_ChIP-seq ENCSR803IYP [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB49" and target="ZBTB49"]
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| Id: | TF_ChIP-seq/ENCSR803IYP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR803IYP [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB49" and target="ZBTB49"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB49 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN372CRS|/analyses/ENCAN372CRS/} has in progress subobject document {66402e27-b4b4-480e-8b68-7d1c966107ad|/documents/66402e27-b4b4-480e-8b68-7d1c966107ad/} audit_internal_action: Released analysis {ENCAN372CRS|/analyses/ENCAN372CRS/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF906SCU|/files/ENCFF906SCU/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.43 and a self consistency ratio of 3.66. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF200LWQ|/files/ENCFF200LWQ/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.43 and a self consistency ratio of 3.66. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR803IYP | float |
TF_ChIP-seq_ENCSR803IYP |
TF_ChIP-seq ENCSR803IYP [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBTB49" and target="ZBTB49"]
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[10.4, 373] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF906SCU.bed.gz | 66.83 KB | 07892980ded40cf1420ec7a462698c20 |
| ENCFF906SCU.bed.gz.dvc | 99.0 B | 55e3b4b40788fb0f0f11795c4b825c41 |
| ENCFF906SCU.tabix.bed.gz | 45.33 KB | 0fada884463bd731f371a9a5065255a9 |
| ENCFF906SCU.tabix.bed.gz.dvc | 105.0 B | 1d67a4cb828dbfaa0b8218b7b209873d |
| ENCFF906SCU.tabix.bed.gz.tbi | 34.43 KB | c41dc60f19e66e6f35a2ffa85ddd1852 |
| ENCFF906SCU.tabix.bed.gz.tbi.dvc | 109.0 B | cfe5d4cb541d312bf7e40345f5d17cfe |
| genomic_resource.yaml | 2.96 KB | 962073987e82d0601676f21f52ef177f |
| genomic_resource_original.yaml | 2.79 KB | bce35a5e08db21b2a4039a5776ec8d69 |
| statistics/ |