| Id: | TF_ChIP-seq/ENCSR802UCW |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR802UCW [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MLXIP" and target="MLXIP"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens MLXIP output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN813ZAH|/analyses/ENCAN813ZAH/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF780JTP|/files/ENCFF780JTP/} processed by ChIP-seq ENCODE4 v1.9.0 GRCh38 pipeline have a rescue ratio of 1.23 and a self consistency ratio of 3.25. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR802UCW | float |
TF_ChIP-seq_ENCSR802UCW |
TF_ChIP-seq ENCSR802UCW [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MLXIP" and target="MLXIP"]
|
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[8.47, 545] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF780JTP.bed.gz | 103.46 KB | b892f6acd0c145f915138e10ab6428b6 |
| ENCFF780JTP.bed.gz.dvc | 100.0 B | eec22380a9cfb97825d9dba0838ac0de |
| ENCFF780JTP.tabix.bed.gz | 71.67 KB | 03867067828da2fe4438a1dbaac31b2a |
| ENCFF780JTP.tabix.bed.gz.dvc | 105.0 B | 3a30c9a9c555533e350cb900b1c32077 |
| ENCFF780JTP.tabix.bed.gz.tbi | 47.14 KB | 22873698989f886cfd54a0e82f5927c1 |
| ENCFF780JTP.tabix.bed.gz.tbi.dvc | 109.0 B | a667accb1c211a09322b267e6346a79b |
| genomic_resource.yaml | 2.22 KB | b08a8cb80557c165b94464cbef827ef7 |
| genomic_resource_original.yaml | 2.06 KB | 44c3c14d428e4551584b82f6ccba175a |
| statistics/ |