TF_ChIP-seq_ENCSR800QIT
TF_ChIP-seq ENCSR800QIT [biosample_summary="Homo sapiens HepG2" and target="HNF1A"]
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| Id: | TF_ChIP-seq/ENCSR800QIT |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR800QIT [biosamplesummary="Homo sapiens HepG2" and target="HNF1A"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN356HNB|/analyses/ENCAN356HNB/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Processed alignments file {ENCFF679MUX|/files/ENCFF679MUX/} processed by ChIP-seq ENCODE3 hg19 pipeline has 18975288 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting HNF1A-human and investigated as a transcription factor is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/} ) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR800QIT | float |
TF_ChIP-seq_ENCSR800QIT |
TF_ChIP-seq ENCSR800QIT [biosample_summary="Homo sapiens HepG2" and target="HNF1A"]
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[5.78, 557] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF227PWE.bed.gz | 246.85 KB | 123eb7f896c8a4e756af0971f159b1b6 |
| ENCFF227PWE.bed.gz.dvc | 100.0 B | 048dee7691203e66cfc4b4953957872e |
| ENCFF227PWE.tabix.bed.gz | 183.26 KB | 51731036875b8c43ee9cbc1fae985758 |
| ENCFF227PWE.tabix.bed.gz.dvc | 106.0 B | 3ab85b437ff340797c1093a773c422d2 |
| ENCFF227PWE.tabix.bed.gz.tbi | 96.25 KB | 593378e9f6ab38e1aa93b9c030c4f3b4 |
| ENCFF227PWE.tabix.bed.gz.tbi.dvc | 109.0 B | 4622e0db842363d9390d368e5fe32a57 |
| genomic_resource.yaml | 1.84 KB | 7f54c4299322792bc196f72b03af52a1 |
| genomic_resource_original.yaml | 1.74 KB | 641504831e43fb28a7bb59731db20ec7 |
| statistics/ |