| Id: | TF_ChIP-seq/ENCSR784BVD |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR784BVD [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MYC" and target="MYC"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens MYC output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN721XFE|/analyses/ENCAN721XFE/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF239IMY|/files/ENCFF239IMY/} processed by ChIP-seq ENCODE4 v1.9.0 GRCh38 pipeline have a rescue ratio of 1.45 and a self consistency ratio of 3.08. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR784BVD | float |
TF_ChIP-seq_ENCSR784BVD |
TF_ChIP-seq ENCSR784BVD [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens MYC" and target="MYC"]
|
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[9.12, 472] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF239IMY.bed.gz | 542.98 KB | 4027b9989f9b6ea70358381d5aedb15c |
| ENCFF239IMY.bed.gz.dvc | 100.0 B | 232acce3a9740a0ef859b630d229981c |
| ENCFF239IMY.tabix.bed.gz | 436.38 KB | 59a290414f26bc7a502c9ed71dea8fb8 |
| ENCFF239IMY.tabix.bed.gz.dvc | 106.0 B | 7404431d7652d55ce794010086f602a5 |
| ENCFF239IMY.tabix.bed.gz.tbi | 149.15 KB | ff49b2fd094be899d66975517a3ec810 |
| ENCFF239IMY.tabix.bed.gz.tbi.dvc | 110.0 B | b7b08727a854ef06d6b67884f8009bfa |
| genomic_resource.yaml | 2.2 KB | 834d99f8798cce91e202da81c034ad5e |
| genomic_resource_original.yaml | 2.04 KB | b4f1ce5a15750ef9b91ad90777c3613d |
| statistics/ |