TF_ChIP-seq_ENCSR782WRO
TF_ChIP-seq ENCSR782WRO [biosample_summary="Homo sapiens K562" and target="BMI1"]
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| Id: | TF_ChIP-seq/ENCSR782WRO |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR782WRO [biosamplesummary="Homo sapiens K562" and target="BMI1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN959VKI|/analyses/ENCAN959VKI/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_internal_action: File {ENCFF352DRR|/files/ENCFF352DRR/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF753LFL|/files/ENCFF753LFL/}, {ENCFF352DRR|/files/ENCFF352DRR/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.34 and a self consistency ratio of 17.36. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF622QWM|/files/ENCFF622QWM/}, {ENCFF024XJB|/files/ENCFF024XJB/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.34 and a self consistency ratio of 17.36. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR782WRO | float |
TF_ChIP-seq_ENCSR782WRO |
TF_ChIP-seq ENCSR782WRO [biosample_summary="Homo sapiens K562" and target="BMI1"]
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[5.65, 342] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF352DRR.bed.gz | 51.32 KB | d1d7aba5f95aad6a5682208eec556e60 |
| ENCFF352DRR.bed.gz.dvc | 99.0 B | 5863420d53955ea2dd9365b5567cb066 |
| ENCFF352DRR.tabix.bed.gz | 36.36 KB | 7439cc21640aee62ef45ef0ce9a64e30 |
| ENCFF352DRR.tabix.bed.gz.dvc | 105.0 B | 5a8670c64802eaf33d49148657ddafff |
| ENCFF352DRR.tabix.bed.gz.tbi | 30.04 KB | b651a0a8adf956e7c7f4daff73dd2ede |
| ENCFF352DRR.tabix.bed.gz.tbi.dvc | 109.0 B | eadd7a39bd270f8964b0ff12c4d2cecf |
| genomic_resource.yaml | 2.66 KB | 0014a249205018f1a6072dff04362c96 |
| genomic_resource_original.yaml | 2.57 KB | c01e23e8558b78c3db40ba610b6b6e71 |
| statistics/ |