TF_ChIP-seq_ENCSR757HBB
TF_ChIP-seq ENCSR757HBB [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens SFPQ" and target="SFPQ"]
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| Id: | TF_ChIP-seq/ENCSR757HBB |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR757HBB [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens SFPQ" and target="SFPQ"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens SFPQ output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN787TCV|/analyses/ENCAN787TCV/} has in progress subobject document {acd713d9-576a-40ac-8f63-3df584ac83b8|/documents/acd713d9-576a-40ac-8f63-3df584ac83b8/} audit_internal_action: Released analysis {ENCAN787TCV|/analyses/ENCAN787TCV/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF779CUH|/files/ENCFF779CUH/} processed by ChIP-seq ENCODE4 v1.5.0 GRCh38 pipeline have a rescue ratio of 1.07 and a self consistency ratio of 2.11. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF145CDF|/files/ENCFF145CDF/} processed by ChIP-seq ENCODE4 v1.5.0 GRCh38 pipeline have a rescue ratio of 1.07 and a self consistency ratio of 2.11. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR757HBB | float |
TF_ChIP-seq_ENCSR757HBB |
TF_ChIP-seq ENCSR757HBB [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens SFPQ" and target="SFPQ"]
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[14, 325] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF779CUH.bed.gz | 381.85 KB | 02763ccaf72da27677f86996f5c02786 |
| ENCFF779CUH.bed.gz.dvc | 100.0 B | 1295f255b1bc119860a3a6397701cf66 |
| ENCFF779CUH.tabix.bed.gz | 308.14 KB | 381e31118274295e53ec185ad0994d88 |
| ENCFF779CUH.tabix.bed.gz.dvc | 106.0 B | 8bf01c1200977c02b2ecadbeff7d893e |
| ENCFF779CUH.tabix.bed.gz.tbi | 111.09 KB | c05836cc8adb2a7b2b4f57388f6cecd8 |
| ENCFF779CUH.tabix.bed.gz.tbi.dvc | 110.0 B | 69094b7cdaff63cdb9143db8d93d19fb |
| genomic_resource.yaml | 2.94 KB | c5ab18e9656ee76d543b67d68d8fd6bd |
| genomic_resource_original.yaml | 2.78 KB | 4299ca36029f0307134358357783cf4b |
| statistics/ |