TF_ChIP-seq_ENCSR752NDX
TF_ChIP-seq ENCSR752NDX [biosample_summary="Homo sapiens HepG2" and target="ZNF282"]
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| Id: | TF_ChIP-seq/ENCSR752NDX |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR752NDX [biosamplesummary="Homo sapiens HepG2" and target="ZNF282"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN450ABO|/analyses/ENCAN450ABO/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_internal_action: File {ENCFF482XNG|/files/ENCFF482XNG/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF764PQJ|/files/ENCFF764PQJ/}, {ENCFF817BBH|/files/ENCFF817BBH/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 2.03 and a self consistency ratio of 1.28. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF482XNG|/files/ENCFF482XNG/}, {ENCFF023LOS|/files/ENCFF023LOS/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 2.03 and a self consistency ratio of 1.28. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR752NDX | float |
TF_ChIP-seq_ENCSR752NDX |
TF_ChIP-seq ENCSR752NDX [biosample_summary="Homo sapiens HepG2" and target="ZNF282"]
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[15.3, 3.56e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF482XNG.bed.gz | 44.8 KB | 19f42f5796fdece06ace070a4c735d17 |
| ENCFF482XNG.bed.gz.dvc | 99.0 B | 8e95353d4494c73959b354b0405f1a71 |
| ENCFF482XNG.tabix.bed.gz | 28.87 KB | 11d0e6b5c4d173a813140ad283377947 |
| ENCFF482XNG.tabix.bed.gz.dvc | 105.0 B | 0d6765197427d292ae142caef8a5df60 |
| ENCFF482XNG.tabix.bed.gz.tbi | 24.0 KB | 5fe15478f3b5468f9be7a8f37b6caad5 |
| ENCFF482XNG.tabix.bed.gz.tbi.dvc | 109.0 B | e76fd1de0cbcac647fc72a8c516fa625 |
| genomic_resource.yaml | 3.21 KB | cf86f7343b720cda78393371c34ad835 |
| genomic_resource_original.yaml | 3.11 KB | 0e63490539e9c35b3801f3921bed6b63 |
| statistics/ |