TF_ChIP-seq_ENCSR734ZOZ
TF_ChIP-seq ENCSR734ZOZ [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (54 years)" and target="POLR2A"]
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| Id: | TF_ChIP-seq/ENCSR734ZOZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR734ZOZ [biosamplesummary="Homo sapiens esophagus squamous epithelium tissue male adult (54 years)" and target="POLR2A"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (54 years) output_type: pseudoreplicated IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN403HSK|/analyses/ENCAN403HSK/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: PBC2 (PCR Bottlenecking Coefficient 2, M1/M2) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where two reads map uniquely (M2). A PBC2 value in the range 0 - 1 is severe bottlenecking, 1 - 3 is moderate bottlenecking, 3 - 10 is mild bottlenecking, > 10 is no bottlenecking. PBC2 value > 10 is recommended, but > 3 is acceptable. ENCODE processed alignments file {ENCFF485STY|/files/ENCFF485STY/} processed by ChIP-seq ENCODE3 hg19 pipeline was generated from a library with PBC2 value of 9.98. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR734ZOZ | float |
TF_ChIP-seq_ENCSR734ZOZ |
TF_ChIP-seq ENCSR734ZOZ [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (54 years)" and target="POLR2A"]
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[15, 133] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF458RGL.bed.gz | 5.35 KB | 5a990b35fe8419a9281fd1e17db081db |
| ENCFF458RGL.bed.gz.dvc | 98.0 B | 32fc7f90ef1d3daf934f013c78a3300f |
| ENCFF458RGL.tabix.bed.gz | 3.4 KB | 3a2b0b1d2c9c7de72cd0a14852dc5e09 |
| ENCFF458RGL.tabix.bed.gz.dvc | 104.0 B | fe8d91073a6a827d546d4348bc9f66d3 |
| ENCFF458RGL.tabix.bed.gz.tbi | 6.82 KB | 560da5f238db2cd3c33912624ee1de14 |
| ENCFF458RGL.tabix.bed.gz.tbi.dvc | 108.0 B | 5f7b17336a15f7c2fd39980de1c62595 |
| genomic_resource.yaml | 2.16 KB | c8e5e60dd615db555c685df87688aa24 |
| genomic_resource_original.yaml | 2.01 KB | 7ce39d80227ca100fd8361310164c158 |
| statistics/ |