| Id: | TF_ChIP-seq/ENCSR714LYA |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR714LYA [biosamplesummary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens PRDM2" and target="PRDM2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using site-specific recombination targeting H. sapiens PRDM2 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN752TQE|/analyses/ENCAN752TQE/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_internal_action: Released analysis {ENCAN752TQE|/analyses/ENCAN752TQE/} has in progress subobject document {ba779218-4d49-442c-a618-0daff6740597|/documents/ba779218-4d49-442c-a618-0daff6740597/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF379CCD|/files/ENCFF379CCD/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline have a rescue ratio of 1.11 and a self consistency ratio of 4.00. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF840FRL|/files/ENCFF840FRL/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline have a rescue ratio of 1.11 and a self consistency ratio of 4.00. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR714LYA | float |
TF_ChIP-seq_ENCSR714LYA |
TF_ChIP-seq ENCSR714LYA [biosample_summary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens PRDM2" and target="PRDM2"]
|
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[16.6, 204] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF379CCD.bed.gz | 26.35 KB | 827dd7e07720c0f8bd0eb6e8d2b62424 |
| ENCFF379CCD.bed.gz.dvc | 99.0 B | a7fd9922fe0e874711b8aa85b99b3b10 |
| ENCFF379CCD.tabix.bed.gz | 21.5 KB | 44145e09e3b9684a24e798dff0aedf4d |
| ENCFF379CCD.tabix.bed.gz.dvc | 105.0 B | b2a1a6c1376ade989913ce0878519381 |
| ENCFF379CCD.tabix.bed.gz.tbi | 17.58 KB | 66a7b121c71005736f7ae3027b70ba7f |
| ENCFF379CCD.tabix.bed.gz.tbi.dvc | 109.0 B | 0c44c2c3af83db8beee6553f4558995e |
| genomic_resource.yaml | 3.06 KB | 3883807d73e5f1f257140bfbd63ba159 |
| genomic_resource_original.yaml | 2.88 KB | 542846888ced8e086c720d9990662d47 |
| statistics/ |