| Id: | TF_ChIP-seq/ENCSR679KXF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR679KXF [biosamplesummary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF23" and target="ZNF23"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF23 output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN805VET|/analyses/ENCAN805VET/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF494YTN|/files/ENCFF494YTN/}, {ENCFF460JBF|/files/ENCFF460JBF/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.32 and a self consistency ratio of 1.43. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF812VZZ|/files/ENCFF812VZZ/}, {ENCFF784GKI|/files/ENCFF784GKI/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.32 and a self consistency ratio of 1.43. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR679KXF | float |
TF_ChIP-seq_ENCSR679KXF |
TF_ChIP-seq ENCSR679KXF [biosample_summary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF23" and target="ZNF23"]
|
 |
[13.8, 1.34e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF460JBF.bed.gz | 30.93 KB | bde01fa34fe058dcb2fc0027ef30b242 |
| ENCFF460JBF.bed.gz.dvc | 99.0 B | 1005751976110f2ef6b97a09441ddc53 |
| ENCFF460JBF.tabix.bed.gz | 20.33 KB | 1ce1a374b9e70d9adff765a6dc57662f |
| ENCFF460JBF.tabix.bed.gz.dvc | 105.0 B | e10731805513ecb9d5df7ec1a82f6e6a |
| ENCFF460JBF.tabix.bed.gz.tbi | 20.06 KB | eef66758458cd725d2a34ec667a724fe |
| ENCFF460JBF.tabix.bed.gz.tbi.dvc | 109.0 B | bea6e71dc21c41f21f94e609abe3b7a2 |
| genomic_resource.yaml | 2.9 KB | cd566fd6cb108fc3f468f07bf55ffabd |
| genomic_resource_original.yaml | 2.72 KB | ccb1d301583321c71e82cb731f0a3cdb |
| statistics/ |