TF_ChIP-seq_ENCSR674IEI
TF_ChIP-seq ENCSR674IEI [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (37 years)" and target="POLR2A"]
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| Id: | TF_ChIP-seq/ENCSR674IEI |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR674IEI [biosamplesummary="Homo sapiens upper lobe of left lung tissue male adult (37 years)" and target="POLR2A"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (37 years) output_type: pseudoreplicated IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN930RAW|/analyses/ENCAN930RAW/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF816UDH|/files/ENCFF816UDH/} processed by ChIP-seq ENCODE3 hg19 pipeline was generated from a library with PBC1 value of 0.90. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR674IEI | float |
TF_ChIP-seq_ENCSR674IEI |
TF_ChIP-seq ENCSR674IEI [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (37 years)" and target="POLR2A"]
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[9.02, 1.66e+03] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF690LWY.bed.gz | 309.75 KB | fbd2aab3b42549781be5530a0c52fa6a |
| ENCFF690LWY.bed.gz.dvc | 100.0 B | a2641b648a3d4f7b43ee85236d6ea6ee |
| ENCFF690LWY.tabix.bed.gz | 235.65 KB | 01680263d7460dc74d4d051f9ebf90b2 |
| ENCFF690LWY.tabix.bed.gz.dvc | 106.0 B | d8ba128aa6b9cbf4697fe0adddbe82b9 |
| ENCFF690LWY.tabix.bed.gz.tbi | 100.19 KB | f9a4bc475bae670a8be21bd87939ddf1 |
| ENCFF690LWY.tabix.bed.gz.tbi.dvc | 110.0 B | 77c19cf0f2a78cc8a3cb6457fd1c7820 |
| genomic_resource.yaml | 2.17 KB | 8a4f09868c83219a479654575c666600 |
| genomic_resource_original.yaml | 2.03 KB | 400c054e8e14f4cec88277fcc6c12cfa |
| statistics/ |