TF_ChIP-seq_ENCSR656SIB
TF_ChIP-seq ENCSR656SIB [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBED5" and target="ZBED5"]
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| Id: | TF_ChIP-seq/ENCSR656SIB |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR656SIB [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBED5" and target="ZBED5"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens ZBED5 output_type: optimal IDR thresholded peaks audit_internal_action: File {ENCFF160DNR|/files/ENCFF160DNR/} with status 'released' is derived from file {ENCFF419RSJ|/files/ENCFF419RSJ/} with status 'archived'. audit_internal_action: Archived analysis {ENCAN943ZRQ|/analyses/ENCAN943ZRQ/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF902PRZ|/files/ENCFF902PRZ/}, {ENCFF552EIB|/files/ENCFF552EIB/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.06 and a self consistency ratio of 2.15. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF424JGX|/files/ENCFF424JGX/}, {ENCFF160DNR|/files/ENCFF160DNR/} processed by ChIP-seq ENCODE3 GRCh38 pipeline have a rescue ratio of 1.06 and a self consistency ratio of 2.15. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR656SIB | float |
TF_ChIP-seq_ENCSR656SIB |
TF_ChIP-seq ENCSR656SIB [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZBED5" and target="ZBED5"]
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[9.7, 702] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF160DNR.bed.gz | 99.24 KB | 430aad61a314d63aba1c5608e8a35ba2 |
| ENCFF160DNR.bed.gz.dvc | 100.0 B | 1001ad1f2242aded898db516e836ae33 |
| ENCFF160DNR.tabix.bed.gz | 69.72 KB | 82b36652500c2ee692bb61a517d322b7 |
| ENCFF160DNR.tabix.bed.gz.dvc | 105.0 B | b2485b75206fff26a0fb02a18d3282c4 |
| ENCFF160DNR.tabix.bed.gz.tbi | 47.52 KB | 80f35675215bdf723842157ca9dca5a3 |
| ENCFF160DNR.tabix.bed.gz.tbi.dvc | 109.0 B | 9f6e7730ca4970102d946d6b6efb9ec0 |
| genomic_resource.yaml | 2.99 KB | 501231725af07b4e1d400c57a3db7f5d |
| genomic_resource_original.yaml | 2.82 KB | 6b5e6e5100cfe31ce2e6a4c536556250 |
| statistics/ |