TF_ChIP-seq_ENCSR647BZJ
TF_ChIP-seq ENCSR647BZJ [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens YEATS2" and target="YEATS2"]
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| Id: | TF_ChIP-seq/ENCSR647BZJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR647BZJ [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens YEATS2" and target="YEATS2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens YEATS2 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN933FEY|/analyses/ENCAN933FEY/} has in progress subobject document {94bde1ff-79f0-4b50-9c44-82990f67c3cc|/documents/94bde1ff-79f0-4b50-9c44-82990f67c3cc/} audit_internal_action: Released analysis {ENCAN933FEY|/analyses/ENCAN933FEY/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF481VPQ|/files/ENCFF481VPQ/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.77 and a self consistency ratio of 3.84. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF409XOA|/files/ENCFF409XOA/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.77 and a self consistency ratio of 3.84. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR647BZJ | float |
TF_ChIP-seq_ENCSR647BZJ |
TF_ChIP-seq ENCSR647BZJ [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens YEATS2" and target="YEATS2"]
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[8.95, 625] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF481VPQ.bed.gz | 356.41 KB | 638176157ddee7056b6324619a37162b |
| ENCFF481VPQ.bed.gz.dvc | 100.0 B | 45bf7dae217dce3f4ef4284ce9f5b073 |
| ENCFF481VPQ.tabix.bed.gz | 278.73 KB | 8d43b72333bd7f4f7785b71e87340a9b |
| ENCFF481VPQ.tabix.bed.gz.dvc | 106.0 B | 3a066120ee1b60d934d7b6e48f5674ce |
| ENCFF481VPQ.tabix.bed.gz.tbi | 121.99 KB | d2a70a792c6c25a6a0ef3f04bb8f119c |
| ENCFF481VPQ.tabix.bed.gz.tbi.dvc | 110.0 B | 4684d77c9e34c1216b8ce82e3fd325c9 |
| genomic_resource.yaml | 2.96 KB | c12c64f0f42a6d5adb9ba16e7e244a6f |
| genomic_resource_original.yaml | 2.79 KB | c17ffc837c62b4ce2ba55c081e29d980 |
| statistics/ |