TF_ChIP-seq_ENCSR628APV
TF_ChIP-seq ENCSR628APV [biosample_summary="Homo sapiens K562" and target="MCM5"]
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| Id: | TF_ChIP-seq/ENCSR628APV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR628APV [biosamplesummary="Homo sapiens K562" and target="MCM5"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN499EQY|/analyses/ENCAN499EQY/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF747VAX|/files/ENCFF747VAX/}, {ENCFF920RYJ|/files/ENCFF920RYJ/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.17 and a self consistency ratio of 1.40. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF288TSU|/files/ENCFF288TSU/}, {ENCFF413XXU|/files/ENCFF413XXU/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.17 and a self consistency ratio of 1.40. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR628APV | float |
TF_ChIP-seq_ENCSR628APV |
TF_ChIP-seq ENCSR628APV [biosample_summary="Homo sapiens K562" and target="MCM5"]
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[12, 139] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF920RYJ.bed.gz | 32.89 KB | ef297c364374a7c5d686706dc6ed6a25 |
| ENCFF920RYJ.bed.gz.dvc | 99.0 B | 033174541fb1dd9b3d28a6d8f04df3b4 |
| ENCFF920RYJ.tabix.bed.gz | 21.47 KB | dc49824067953d5ad581cfee5f5783ab |
| ENCFF920RYJ.tabix.bed.gz.dvc | 105.0 B | 3a3817d18552d4b6914b4f2078de92ed |
| ENCFF920RYJ.tabix.bed.gz.tbi | 17.95 KB | 04a3e98ecf037050f33d82c771fc7a0d |
| ENCFF920RYJ.tabix.bed.gz.tbi.dvc | 109.0 B | c81266159bc137d2e0c212384255a3f4 |
| genomic_resource.yaml | 3.01 KB | 80f989ab93e9f36b7cabcd751f0de4d0 |
| genomic_resource_original.yaml | 2.92 KB | 095089c841a89660c3e0c0deda1bcc47 |
| statistics/ |