TF_ChIP-seq_ENCSR600SMN
TF_ChIP-seq ENCSR600SMN [biosample_summary="Homo sapiens HEK293 genetically modified (insertion) using CRISPR targeting H. sapiens HOXA7" and target="HOXA7"]
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| Id: | TF_ChIP-seq/ENCSR600SMN |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR600SMN [biosamplesummary="Homo sapiens HEK293 genetically modified (insertion) using CRISPR targeting H. sapiens HOXA7" and target="HOXA7"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens HOXA7 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN485HAD|/analyses/ENCAN485HAD/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF521UKW|/files/ENCFF521UKW/} processed by ChIP-seq ENCODE4 v1.8.1 GRCh38 pipeline have a rescue ratio of 1.25 and a self consistency ratio of 4.31. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR600SMN | float |
TF_ChIP-seq_ENCSR600SMN |
TF_ChIP-seq ENCSR600SMN [biosample_summary="Homo sapiens HEK293 genetically modified (insertion) using CRISPR targeting H. sapiens HOXA7" and target="HOXA7"]
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[7.3, 181] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF521UKW.bed.gz | 6.91 KB | 4a372019686465ec70aea20916152411 |
| ENCFF521UKW.bed.gz.dvc | 98.0 B | 1bc941525ea934b7f326a0d26bc4f1dd |
| ENCFF521UKW.tabix.bed.gz | 4.58 KB | 41e0a9445224746ee0ab170a75f133f6 |
| ENCFF521UKW.tabix.bed.gz.dvc | 104.0 B | 08c79c008ae97111e827b71f0423109d |
| ENCFF521UKW.tabix.bed.gz.tbi | 7.33 KB | 89f87f5da8df46e973922a0be59b6e19 |
| ENCFF521UKW.tabix.bed.gz.tbi.dvc | 108.0 B | 920ef2195314cb482d02263d41d3b596 |
| genomic_resource.yaml | 2.22 KB | cd4e81a347ed28ab6afdf457f012a87e |
| genomic_resource_original.yaml | 2.06 KB | ad3e781cd228466baf04bf8468d3c14c |
| statistics/ |