TF_ChIP-seq_ENCSR552YWL
TF_ChIP-seq ENCSR552YWL [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens KLF12" and target="KLF12"]
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| Id: | TF_ChIP-seq/ENCSR552YWL |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR552YWL [biosamplesummary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens KLF12" and target="KLF12"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using CRISPR targeting H. sapiens KLF12 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN805KPX|/analyses/ENCAN805KPX/} has in progress subobject document {8aff78be-107c-4ce9-aa8a-bd4a93305430|/documents/8aff78be-107c-4ce9-aa8a-bd4a93305430/} audit_internal_action: Released analysis {ENCAN805KPX|/analyses/ENCAN805KPX/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF124UUN|/files/ENCFF124UUN/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.17 and a self consistency ratio of 2.32. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF395LSO|/files/ENCFF395LSO/} processed by ChIP-seq ENCODE4 v1.4.0 GRCh38 pipeline have a rescue ratio of 1.17 and a self consistency ratio of 2.32. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR552YWL | float |
TF_ChIP-seq_ENCSR552YWL |
TF_ChIP-seq ENCSR552YWL [biosample_summary="Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens KLF12" and target="KLF12"]
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[10.3, 417] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF124UUN.bed.gz | 275.48 KB | e7417797e97529f66aae086834594e70 |
| ENCFF124UUN.bed.gz.dvc | 100.0 B | ffd25ad07b36ca8427e2d642a2bef4e9 |
| ENCFF124UUN.tabix.bed.gz | 214.37 KB | 456141dd72bca7bc69fb51933e80d999 |
| ENCFF124UUN.tabix.bed.gz.dvc | 106.0 B | 4cfb85256bda107f59737f915ab63f50 |
| ENCFF124UUN.tabix.bed.gz.tbi | 90.92 KB | e7c814dd67696019b92878705bbbc4a1 |
| ENCFF124UUN.tabix.bed.gz.tbi.dvc | 109.0 B | 32b6f0c3cfa133a75e2a2dc858ebec49 |
| genomic_resource.yaml | 2.95 KB | 04a206dbbd2be1c2b66f8dae7c928e55 |
| genomic_resource_original.yaml | 2.79 KB | 3260f0f4ce60a4942193f59e3fa00cf7 |
| statistics/ |