| Id: | TF_ChIP-seq/ENCSR551KAP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR551KAP [biosamplesummary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF138" and target="ZNF138"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF138 output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN452KPS|/analyses/ENCAN452KPS/} has in progress subobject document {bbafc9cb-dcf9-434b-82b0-0f37fd81853d|/documents/bbafc9cb-dcf9-434b-82b0-0f37fd81853d/} audit_internal_action: Released analysis {ENCAN452KPS|/analyses/ENCAN452KPS/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF454RVK|/files/ENCFF454RVK/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline have a rescue ratio of 1.21 and a self consistency ratio of 2.64. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF585PTQ|/files/ENCFF585PTQ/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline have a rescue ratio of 1.21 and a self consistency ratio of 2.64. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR551KAP | float |
TF_ChIP-seq_ENCSR551KAP |
TF_ChIP-seq ENCSR551KAP [biosample_summary="Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF138" and target="ZNF138"]
|
 |
[10.9, 165] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF454RVK.bed.gz | 28.08 KB | 6525fc13f25ca643809e6ce5c38bde61 |
| ENCFF454RVK.bed.gz.dvc | 99.0 B | 2825d39b21baa05f3f6f80e9016c4bf7 |
| ENCFF454RVK.tabix.bed.gz | 17.99 KB | af159ac2c05576ae9ca31a66a01cd64f |
| ENCFF454RVK.tabix.bed.gz.dvc | 105.0 B | 14305b19b8b0f0787cb69aaefcd02ead |
| ENCFF454RVK.tabix.bed.gz.tbi | 19.33 KB | 6af957deb2b43f9c8931970586940abf |
| ENCFF454RVK.tabix.bed.gz.tbi.dvc | 109.0 B | feec1dc77478c8343bcf076fb67ff3c8 |
| genomic_resource.yaml | 3.07 KB | 44a2cf42d12598de4df19846fa042779 |
| genomic_resource_original.yaml | 2.88 KB | 20118ebcc42539ff8477052ab12b1a5b |
| statistics/ |