TF_ChIP-seq_ENCSR543BVU
TF_ChIP-seq ENCSR543BVU [biosample_summary="Homo sapiens HepG2" and target="SOX6"]
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| Id: | TF_ChIP-seq/ENCSR543BVU |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR543BVU [biosamplesummary="Homo sapiens HepG2" and target="SOX6"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: optimal IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN710YEW|/analyses/ENCAN710YEW/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF683RLL|/files/ENCFF683RLL/}, {ENCFF706AIM|/files/ENCFF706AIM/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.40 and a self consistency ratio of 1.24. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. audit_warning: Replicate concordance in ChIP-seq experiments is measured by calculating IDR values (Irreproducible Discovery Rate). ENCODE processed IDR thresholded peaks files {ENCFF432DIT|/files/ENCFF432DIT/}, {ENCFF425UQS|/files/ENCFF425UQS/} processed by ChIP-seq ENCODE3 hg19 pipeline have a rescue ratio of 2.40 and a self consistency ratio of 1.24. According to ENCODE standards, having both rescue ratio and self consistency ratio values < 2 is recommended, but having only one of the ratio values < 2 is acceptable. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR543BVU | float |
TF_ChIP-seq_ENCSR543BVU |
TF_ChIP-seq ENCSR543BVU [biosample_summary="Homo sapiens HepG2" and target="SOX6"]
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[13.3, 511] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF432DIT.bed.gz | 36.27 KB | e6719c81f02b90d02f1a15c0eff4e0b8 |
| ENCFF432DIT.bed.gz.dvc | 99.0 B | 0f7b4563b2fe42462684b9bcf71bfe5e |
| ENCFF432DIT.tabix.bed.gz | 23.51 KB | 57460fdcfefe0f913dad022262cde365 |
| ENCFF432DIT.tabix.bed.gz.dvc | 105.0 B | 2ecc4ff2acf12eea6d245fda763b1f03 |
| ENCFF432DIT.tabix.bed.gz.tbi | 21.42 KB | ec2db92561cec778aa2b78b644758702 |
| ENCFF432DIT.tabix.bed.gz.tbi.dvc | 109.0 B | 013b1962a87e73b7d7cfbb82b0c0be79 |
| genomic_resource.yaml | 2.47 KB | 32402f136868e9064c07e786226b8440 |
| genomic_resource_original.yaml | 2.38 KB | c9f7dc7f8208bbb5f46c5a92ab894d04 |
| statistics/ |