| Id: | TF_ChIP-seq/ENCSR542FLV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
TFChIP-seq ENCSR542FLV [biosamplesummary="Homo sapiens GM12878" and target="ZBTB33"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 4 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN779GKZ|/analyses/ENCAN779GKZ/} has in progress subobject document {5423c79a-a771-413c-a737-e268a16c5e76|/documents/5423c79a-a771-413c-a737-e268a16c5e76/} audit_internal_action: Released analysis {ENCAN779GKZ|/analyses/ENCAN779GKZ/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} audit_warning: PBC2 (PCR Bottlenecking Coefficient 2, M1/M2) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where two reads map uniquely (M2). A PBC2 value in the range 0 - 1 is severe bottlenecking, 1 - 3 is moderate bottlenecking, 3 - 10 is mild bottlenecking, > 10 is no bottlenecking. PBC2 value > 10 is recommended, but > 3 is acceptable. ENCODE processed alignments file {ENCFF739ZTJ|/files/ENCFF739ZTJ/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline was generated from a library with PBC2 value of 9.99. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR542FLV | float |
TF_ChIP-seq_ENCSR542FLV |
TF_ChIP-seq ENCSR542FLV [biosample_summary="Homo sapiens GM12878" and target="ZBTB33"]
|
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[13.7, 935] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF845VSZ.bed.gz | 118.45 KB | ee6ef049eaf8ab6e8e940da960098b16 |
| ENCFF845VSZ.bed.gz.dvc | 100.0 B | 54c7f76c5d25cb7acede485ee45e541f |
| ENCFF845VSZ.tabix.bed.gz | 83.94 KB | bbb5a6297f187f3c1ae5a4a382e8d10b |
| ENCFF845VSZ.tabix.bed.gz.dvc | 105.0 B | 8829693f8c93f2bc52b9f29c65d1960a |
| ENCFF845VSZ.tabix.bed.gz.tbi | 57.98 KB | f479ab5c55ff9dfdc64293d330490a26 |
| ENCFF845VSZ.tabix.bed.gz.tbi.dvc | 109.0 B | 6c0a90393292f6220292b82f571e1394 |
| genomic_resource.yaml | 2.21 KB | 5a9052401b9c9a2639423e2841b37487 |
| genomic_resource_original.yaml | 2.11 KB | 6b57de62a14355ae48d84ea1b2bb5b67 |
| statistics/ |